API#
Bionty: Data model generator for biology.
Import the package:
import bionty as bt
Entities:
|
Gene. |
|
Protein. |
|
Species. |
|
Cell type. |
|
Cell markers. |
|
Tissue. |
|
Disease. |
|
Experimental Factor Ontology. |
The base model for every entity class is:
|
Biological entity as a EntityTable. |
Lookup of vocabulary:
|
Look up a list of values via tab completion. |
External API:
|
Interface with ontologies via pronto. |