lamindb.dev.datasets

Small example datasets.

file_fcs()	Return fcs file example.
file_jpg_paradisi05()	Return jpg file example.
file_fastq()	Mini mock fastq file.
file_bam()	Mini mock bam file.
file_mini_csv()	Mini csv file.
dir_scrnaseq_cellranger()	Directory with exemplary scrnaseq cellranger input and output.
generate_cell_ranger_files(sample_name[, ...])	Generate mock cell ranger outputs.
df_iris()	The iris dataset as in sklearn.
anndata_mouse_sc_lymph_node()	Mouse lymph node scRNA-seq dataset from EBI.
anndata_human_immune_cells()	Cross-tissue immune cell analysis reveals tissue-specific features in humans.
anndata_pbmc68k_reduced()	Modified from scanpy.datasets.pbmc68k_reduced().
anndata_pbmc3k_processed()	Modified from scanpy.pbmc3k_processed().
anndata_with_obs()	Create a mini anndata with cell_type, disease and tissue.