lnschema_bionty.CellLine#
- class lnschema_bionty.CellLine(name: str, ontology_id: Optional[str], abbr: Optional[str], synonyms: Optional[str], description: Optional[str], parents: List[CellLine], bionty_source: Optional[BiontySource])#
Bases:
BioRegistryCell lines - Cell Line Ontology.
Notes
For more info, see tutorial Manage biological registries
Bulk create CellLine records via
from_values.Examples
>>> standard_name = lb.CellLine.bionty().standardize(["K562"])[0] >>> record = lb.CellLine.from_bionty(name=standard_name)
Fields
- id AutoField
Internal id, valid only in one DB instance.
- uid CharField
A universal id (hash of selected field).
- name CharField
Name of the cell line.
- ontology_id CharField
Ontology ID of the cell line.
- abbr CharField
A unique abbreviation of cell line.
- synonyms TextField
Bar-separated (|) synonyms that correspond to this cell line.
- description TextField
Description of the cell line.
- bionty_source ForeignKey
BiontySourcethis cell line associates with.
- created_at DateTimeField
Time of creation of record.
- updated_at DateTimeField
Time of last update to record.
- created_by ForeignKey
Creator of record, a
User.
- parents ManyToManyField
Parent cell line records.
- files ManyToManyField
Files linked to the cell line.
- datasets ManyToManyField
Datasets linked to the cell line.
Methods