lnschema_bionty.CellType#
- class lnschema_bionty.CellType(name: str, ontology_id: Optional[str], abbr: Optional[str], synonyms: Optional[str], description: Optional[str], parents: List[CellType], bionty_source: Optional[BiontySource])#
- class lnschema_bionty.CellType(*db_args)
Bases:
BioRegistryCell types - Cell Ontology.
Notes
For more info, see tutorial Manage biological registries
Bulk create CellType records via
from_values.Examples
>>> record = lb.CellType.from_bionty(name="T cell") >>> record.save()
Fields
- id CharField
A wrapper for a deferred-loading field. When the value is read from this object the first time, the query is executed.
- name CharField
Name of the cell type.
- ontology_id CharField
Ontology ID of the cell type.
- abbr CharField
A unique abbreviation of cell type.
- synonyms TextField
Bar-separated (|) synonyms that correspond to this cell type.
- description TextField
Description of the cell type.
- bionty_source ForeignKey
BiontySourcethis cell type associates with.
- created_at DateTimeField
Time of creation of record.
- updated_at DateTimeField
Time of last update to record.
- created_by ForeignKey
Creator of record, a
User.
- parents ManyToManyField
Parent cell type records.
- files ManyToManyField
Files linked to the cell type.
- datasets ManyToManyField
Datasets linked to the cell type.
Methods