Changelog#
Name |
PR |
Developer |
Date |
Version |
---|---|---|---|---|
:memo: Re-organize |
2023-03-30 |
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πΈ Check schema version upon instance init |
2023-03-30 |
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π Remove use_fsspec from session add |
2023-03-30 |
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β»οΈ Refactor features |
2023-03-29 |
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π¨ Move submodules into subdirectory |
2023-03-29 |
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π Replace |
2023-03-28 |
0.35.5 |
||
π Move remaining core entities to root level |
2023-03-27 |
0.35.4 |
||
πΈ Polish docs & bump lndb |
2023-03-27 |
0.35.3 |
||
π Move |
2023-03-27 |
0.35.2 |
||
β»οΈ Fix |
2023-03-27 |
0.35.1 |
||
π Rename |
2023-03-25 |
0.35.0 |
||
π Introduce |
2023-03-24 |
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ποΈ Combine |
2023-03-23 |
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π Fix optional dependencies |
2023-03-22 |
0.34.2 |
||
π₯ Remove |
2023-03-22 |
|||
β¬οΈ Updated |
2023-03-21 |
0.34.1 |
||
β¬οΈ Upgrade to |
2023-03-20 |
0.34.0 |
||
β»οΈ Move storage-related code to |
2023-03-20 |
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π Fix gene id |
2023-03-17 |
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π Check if env variable exists before trying to get his value |
2023-03-15 |
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πΈ Do not yet show deprecation warning for |
2023-03-15 |
0.33.4 |
||
π· Restore streaming test from cloud |
2023-03-15 |
0.33.3 |
||
β¬οΈ typeguard<3.0.0 |
2023-03-15 |
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β Remove typeguard dependency |
2023-03-15 |
0.33.2 |
||
β¬οΈ Update core |
2023-03-15 |
0.33.1 |
||
π Replace |
2023-03-14 |
0.33.0 |
||
πΈ Smart about |
2023-03-14 |
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β¨ |
2023-03-14 |
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ποΈ Introduce |
2023-03-13 |
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π Improve the docstrings of |
2023-03-10 |
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π Hide CI related cells in notebooks |
2023-03-10 |
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π Update docs to clarify sign up and log in |
2023-03-10 |
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π Prettier species query |
2023-03-09 |
0.32.0 |
||
π Refactor docs sidebar |
2023-03-09 |
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β¬οΈ Upgrade |
2023-03-09 |
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π₯ Remove |
2023-03-09 |
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β Remove bionty as a dependency |
2023-03-09 |
0.32.0rc1 |
||
π Replace |
2023-03-07 |
0.31.1 |
||
π Link FAQ and guide to session and notebook API |
2023-03-07 |
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β¬οΈ Upgrade lndb |
2023-03-07 |
0.31.0 |
||
β¬οΈ Upgrade lndb |
2023-03-07 |
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π Move ingest-folder back to faq |
2023-03-06 |
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πΈ Improve clarity of |
2023-03-06 |
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π Fix CI |
2023-03-06 |
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π Rename data objects to data or datasets in titles |
2023-03-06 |
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π Duplicate README to the guide landing page |
2023-03-06 |
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β¨ Allow uploading zarr from local paths |
2023-03-05 |
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π Prettify guide landing page |
2023-03-05 |
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π Fix upsert for dobject and CI |
2023-03-03 |
0.30.3 |
||
π Simplify docs |
2023-03-03 |
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πΈ Do not error, just warn upon installation of lamin |
2023-03-02 |
0.30.2 |
||
π Fix iterdir to not list itself |
2023-03-02 |
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π₯ Remove |
2023-03-01 |
0.30.1 |
||
π Fix for listing cloud dir |
2023-03-01 |
0.30.0 |
||
π¨ Add |
2023-03-01 |
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π Rename |
2023-03-01 |
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π Ensure filepath is absolute |
2023-03-01 |
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π¨ Allow passing a list of relpaths to |
2023-02-28 |
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β¨ Infer filesystem for anndata read and write |
2023-02-25 |
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π Replace |
2023-02-25 |
0.29.1 |
||
π Add nbproject note box to ingest guide |
2023-02-24 |
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π± |
2023-02-24 |
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β¬οΈ Upgrade lnschema-core to 0.28.6 |
2023-02-23 |
0.29.0 |
||
π₯ Move |
2023-02-23 |
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π Fix trailing slash within lamindb |
2023-02-22 |
0.28.5 |
||
π· Fix CI config |
2023-02-22 |
0.28.4 |
||
π Fix version check |
2023-02-22 |
0.28.3 |
||
π· Collect docs artifacts |
2023-02-22 |
0.28.2 |
||
π Fix trailing slash in storage root |
2023-02-22 |
0.28.1 |
||
π Rename |
2023-02-21 |
0.28.0 |
||
π Another occurance of local filepath |
2023-02-21 |
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π· Better CI and better arg validation |
2023-02-21 |
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π Fix tracking local existing data |
2023-02-21 |
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π Fix parents for existing data ingestion |
2023-02-21 |
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π¨ Disable multiple select results for .add and .delete by fields |
2023-02-20 |
0.28rc1 |
||
β‘οΈ Replace CloudPath with UPath |
2023-02-19 |
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π· Move fixtures from nox to conftest |
2023-02-17 |
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π Simplify output for dfolder faq |
2023-02-17 |
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π Guide to ingest a folder |
2023-02-17 |
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π Fix determination of sqlite vs postgres |
2023-02-17 |
0.27.2 |
||
π¨ Improve |
2023-02-16 |
0.27.1 |
||
πΈ Add relationship between |
2023-02-16 |
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β¨ Confirm dialog for deleting data from storage |
2023-02-16 |
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β¨ Ingest existing data from configured local storage |
2023-02-16 |
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πΈ Proper client server check for |
2023-02-16 |
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β¬οΈ Upgrade |
2023-02-16 |
|||
β¬οΈ Upgrade and rename |
2023-02-14 |
0.27.0 |
||
π Fix tracking of added records during |
2023-02-13 |
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β¨ Added |
2023-02-13 |
|||
π¨ Added |
2023-02-13 |
|||
π¨ Added zarr tests back and cleaned up faq |
2023-02-13 |
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π₯ Drop populating runin and tracking usage upon load |
2023-02-13 |
|||
πΈ Better |
2023-02-09 |
|||
πΈ Make DObject upload ACID |
2023-02-08 |
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π Add notebook on ORM lazy loading behavior to FAQ |
2023-02-06 |
|||
π¨ Robust generation of |
2023-02-06 |
0.26.1 |
||
π¨ Added erroring behavior when file doesnβt exist for |
2023-02-06 |
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π Removed extra fields in dev.datasets.pbmc68k |
2023-02-06 |
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β Removed lnbfx and fix CI |
2023-02-06 |
|||
π Query book |
2023-02-06 |
|||
π©Ή Print dobject name for zarr upload |
2023-02-02 |
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:bug: Fix load |
2023-02-02 |
|||
π₯ Disable ORM relationship preview |
2023-02-02 |
|||
β¨ Allow ingesting existing data in the cloud |
2023-02-02 |
|||
π Correct filepath in header |
2023-02-01 |
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πΈ Add post-setup settings manager, error on duplicate insert Breaking |
2023-02-01 |
0.26.0 |
||
π Fix fallback for notebook name |
2023-01-30 |
0.25.7 |
||
π₯ Remove |
2023-01-30 |
|||
β¬οΈ Upgrade lndb-setup 0.30.11 |
2023-01-30 |
0.25.6 |
||
β¬οΈ Cleaned up dependencies so that itβs not as redundant to lndb-setup |
2023-01-27 |
|||
β Bring back lnfbx |
2023-01-26 |
0.25.5 |
||
π Prettier section headings in the docs |
2023-01-26 |
|||
π Pin |
2023-01-26 |
0.25.4 |
||
πΈ Auto-populate relationship-associated foreign key fields |
2023-01-26 |
0.25.3 |
||
π Fix strict type checking for relationships |
2023-01-24 |
0.25.2 |
||
π©Ί Increase migrations testing robustness postgres |
2023-01-24 |
|||
π Remove linked-select notebook |
2023-01-24 |
|||
β¬οΈ Upgrade lnschema-core to 0.25.1 |
2023-01-23 |
0.25.1 |
||
β¨ Add explicit remote sqlite instance locking to write operations |
2023-01-23 |
|||
β»οΈ Refactored FAQ |
2023-01-23 |
|||
π Create data validation FAQ |
2023-01-23 |
|||
β Remove s3fs dependency |
2023-01-23 |
|||
β¬οΈ Upgrade lndb-setup to 0.30.8 |
2023-01-23 |
|||
π©Ή Better treat edge cases upon signup, login, failed instance loading |
2023-01-20 |
0.25.0 |
||
πΈ Introduce data validation on the ORM level |
2023-01-20 |
|||
β»οΈ Reorganize quickstart and get-started |
2023-01-20 |
|||
π Refactor init guide and show bionty versions in guide |
2023-01-18 |
0.24.6 |
||
β¬οΈ Upgrade wetlab schema to 0.13.3 |
2023-01-17 |
0.24.5 |
||
π Fix taxon_id type and upgrade bionty |
2023-01-17 |
0.24.4 |
||
β¬οΈ Upgrade to lnschema-bionty 0.6.7 |
2023-01-17 |
|||
β¬οΈ Upgrade to lndb-setup 0.30.6 |
2023-01-16 |
0.24.3 |
||
β¬οΈ Upgrade to lndb_setup==0.30.5 |
2023-01-16 |
0.24.2 |
||
β¬οΈ Upgrade lndb-setup to 0.30.4 |
2023-01-16 |
0.24.1 |
||
β¬οΈ Upgrade to lndb-setup 0.30.2 |
2023-01-16 |
0.24.0 |
||
πΈ Better hash exception |
2023-01-12 |
|||
πΈ Safer session behavior 2/2 Breaking |
2023-01-12 |
0.23.0 |
||
π· Extend CI to py3.8-3.10 |
2023-01-12 |
0.22.5 |
||
πΈ Safer session behavior 1/2 |
2023-01-11 |
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β¬οΈ Upgrade lndb-setup |
2023-01-10 |
|||
π Re-arrange notebooks |
2023-01-09 |
|||
πΈ Make |
2023-01-09 |
0.22.4 |
||
π Improving wording of definitions |
2023-01-08 |
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π Fixes for lndocs upgrade |
2023-01-08 |
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β»οΈ Refactor guide |
2023-01-08 |
|||
β¬οΈ Upgrade |
2023-01-05 |
0.22.3 |
||
β¬οΈ Upgrade to |
2023-01-05 |
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Fix typos |
2023-01-02 |
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π Fix bugs in |
2022-12-22 |
0.22.2 |
||
β Error behavior for ingest |
2022-12-20 |
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π¨ Simplify |
2022-12-16 |
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β¬οΈ Upgrade lndb-setup |
2022-12-16 |
0.22.1 |
||
πΈ Better CLI & logging |
2022-12-15 |
0.22.0 |
||
β¬οΈ Updated setup |
2022-12-15 |
0.21.5 |
||
πΈ Make |
2022-12-14 |
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β¬οΈ Upgrade wetlab |
2022-12-13 |
0.21.4 |
||
β¬οΈ Upgrade lndb-setup |
2022-12-13 |
0.21.3 |
||
β¬οΈ Upgrade lndb-setup |
2022-12-13 |
0.21.2 |
||
β¬οΈ Upgrade lndb-setup |
2022-12-12 |
0.21.1 |
||
π Fix docs |
2022-12-09 |
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π¨ Integrate |
2022-12-09 |
0.21.0 |
||
β¬οΈ Upgrade setup, core & wetlab schema |
2022-12-08 |
0.20.0 |
||
π₯ Drop all logic related to dynamic settings |
2022-12-08 |
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β¬οΈ Upgrade wetlab |
2022-12-06 |
0.19.4 |
||
β¬οΈ Upgrade wetlab |
2022-12-06 |
0.19.3 |
||
β¬οΈ Upgrade wetlab |
2022-12-06 |
0.19.2 |
||
π Fix view |
2022-12-05 |
0.19.1 |
||
π¨ Enable inheriting wetlab schemas |
2022-12-05 |
0.19.0 |
||
β Better tests for features hashing |
2022-12-04 |
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β¬οΈ Upgrade lndb-setup |
2022-12-04 |
0.18.9 |
||
β¨ Check duplication before inserting records |
2022-11-30 |
0.18.8 |
||
πΈ Do not autoflush upon select |
2022-11-30 |
0.18.7 |
||
π Fix bug in schema module name lookup |
2022-11-29 |
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β¬οΈ Updated wetlab |
2022-11-29 |
0.18.6 |
||
β¬οΈ Upgrade |
2022-11-28 |
0.18.5 |
||
β¨ Improve lazy selectors |
2022-11-28 |
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β¬οΈ Update wetlab schema |
2022-11-28 |
0.18.4 |
||
β¬οΈ Upgrade wetlab schema |
2022-11-28 |
0.18.3 |
||
β¬οΈ Upgrade |
2022-11-28 |
0.18.2 |
||
β¬οΈ Upgrade lndb-setup to 0.18.1 |
2022-11-25 |
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π₯ Removed bioreadout |
2022-11-24 |
0.18.1 |
||
β¨ Add lazy selectors to |
2022-11-23 |
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ποΈ Persist the session |
2022-11-23 |
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β¬οΈ Upgrade lndb-setup |
2022-11-23 |
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β¨ Add subset function for dobjects |
2022-11-23 |
0.18.0 |
||
π¨ Drop |
2022-11-22 |
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π¨ Simplify schema module handling |
2022-11-22 |
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π Bring back guide to linking sample-level metadata |
2022-11-21 |
0.17.0 |
||
π Add flow example back to main guide |
2022-11-21 |
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π Update schema |
2022-11-21 |
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π©Ή Restore default |
2022-11-20 |
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π¨ Prettify API |
2022-11-18 |
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π Also return existing features |
2022-11-18 |
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π Fix select gene doc |
2022-11-18 |
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ποΈ Refactor ingest |
2022-11-17 |
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β¨ Knowledge guide |
2022-11-16 |
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π¨ Separate |
2022-11-16 |
0.16.0 |
||
π Fix data source |
2022-11-15 |
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π Move storage key to core schema |
2022-11-14 |
0.15.0 |
||
π Fixed |
2022-11-14 |
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β¨ Initialize |
2022-11-12 |
0.14.0 |
||
ποΈ Aggregate |
2022-11-12 |
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β¬οΈ Updated bionty |
2022-11-11 |
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π Make notebook for |
2022-11-11 |
0.13.0 |
||
β¨ Join dataframes |
2022-11-10 |
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β¨ Fields in join |
2022-11-10 |
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β Add tests for zarr ingest and load |
2022-11-10 |
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π Rename |
2022-11-10 |
|||
π Fix |
2022-11-09 |
0.12.1 |
||
π Rename view arg |
2022-11-09 |
0.12.0 |
||
π Refactor select notebooks |
2022-11-08 |
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π Simplify arg in link |
2022-11-08 |
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β»οΈ Refactor select |
2022-11-08 |
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β¬οΈ Update to |
2022-11-06 |
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π Rename entries to records in link |
2022-11-04 |
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π Improve guide |
2022-11-04 |
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π¨ Migrate to the new schema modules |
2022-11-04 |
0.11.0 |
||
π₯ Removed |
2022-11-03 |
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π¨ Removed |
2022-11-03 |
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π Move |
2022-11-03 |
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π Remove A prefix from notebooks |
2022-11-03 |
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β¨ Storage related features |
2022-11-03 |
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π¨ Simplify generating records |
2022-11-02 |
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π Fixed bug in linking features |
2022-11-01 |
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π± Added |
2022-11-01 |
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π Rename |
2022-11-01 |
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π¨ Added LinkFeatureToKnowledgeTable |
2022-10-31 |
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β¬οΈ Update lndb setup |
2022-10-27 |
0.10.0 |
||
β¬οΈ Pinned bionty version |
2022-10-26 |
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β¬οΈ Updated to lnschema_bionty 0.4.4 |
2022-10-24 |
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π₯ Remove lndb-hub import |
2022-10-24 |
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β¨ Enable to get metadata from |
2022-10-24 |
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π Rename row to record when not yet added to the DB |
2022-10-23 |
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β¬οΈ Update lndb hub version |
2022-10-23 |
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π¨ Replace |
2022-10-22 |
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β¬οΈ Upgrade |
2022-10-22 |
|||
π Update postgres faq notebook |
2022-10-22 |
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π Moved the rds notebooks to |
2022-10-21 |
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β¨ Added |
2022-10-21 |
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π₯ Remove hub import |
2022-10-21 |
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π¨ Overhaul |
2022-10-21 |
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π©Ή Skip nc_evolutions table created by nocodb |
2022-10-21 |
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β¨ Added |
2022-10-20 |
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β¬οΈ Upgrade wetlab schema |
2022-10-20 |
0.9.6 |
||
β¬οΈ Added |
2022-10-19 |
0.9.5 |
||
π©Ή Fixed rds nbs |
2022-10-18 |
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π Add prisma examples and implementation ideas |
2022-10-18 |
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β»οΈ Refactor linked select |
2022-10-18 |
0.9.4 |
||
βοΈ Fix typo in link table entry fetching |
2022-10-17 |
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π Fixed link via link tables |
2022-10-15 |
0.9.3 |
||
β¨ Add an option to use |
2022-10-15 |
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β¨ Load returns filepath if no in-memory format is found |
2022-10-13 |
0.9.2 |
||
π¨ Clean up dtransform_in |
2022-10-13 |
0.9.1 |
||
π¨ Continue overhaul |
2022-10-13 |
0.9.0 |
||
π¨ Refactor linking dobjects & base64 encode checksum |
2022-10-13 |
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π View only prints existing tables |
2022-10-12 |
|||
β¨ Added |
2022-10-12 |
0.8.3 |
||
β¬οΈ Added bioreadout lookup to guide |
2022-10-12 |
|||
π Rename query to select |
2022-10-12 |
|||
π©Ή Fix out of sync db warning |
2022-10-12 |
|||
β¨ Add streaming zarr write and streaming h5ad and zarr read |
2022-10-12 |
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π Cosmetics |
2022-10-12 |
|||
β»οΈ Refactor ingest & insert |
2022-10-11 |
|||
β¨ Compute checksum during ingest |
2022-10-11 |
|||
π Moved bfx ingestion to faq |
2022-10-11 |
|||
β¬οΈ Upgrade to |
2022-10-10 |
0.8.2 |
||
π Improved ingest guides, fixed linked entry bugs |
2022-10-10 |
|||
π Fixed dobject_biometa entry insertion |
2022-10-10 |
0.8.1 |
||
π Update test users in docs |
2022-10-10 |
|||
β¬οΈ Upgrade |
2022-10-10 |
0.8.0 |
||
π¨ |
2022-10-10 |
|||
β¬οΈ Upgrade |
2022-10-10 |
|||
β¬οΈ Upgrade |
2022-10-10 |
|||
π Improved docs of |
2022-10-10 |
0.7.2 |
||
π₯ Refactor |
2022-10-08 |
0.7.1 |
||
π Overhauled get-started |
2022-10-07 |
|||
πΈ Check for existence before deletion |
2022-10-07 |
|||
π¨ Make ingest a static class |
2022-10-07 |
0.7.0 |
||
β¬οΈ Upgrade to core schema 0.10.0 |
2022-10-07 |
|||
β¨ New ingest API |
2022-10-05 |
0.6.0 |
||
π Overhaul documentation |
2022-10-05 |
|||
π§ Update lndb setup to 0.9.4 |
2022-10-04 |
|||
π§ Enable setup outside cli |
2022-10-04 |
|||
β¬οΈ Upgrade lndb_setup and bionty |
2022-10-03 |
0.5.0 0.5.0 |
||
πΈ Check for migrations upon import |
2022-10-03 |
|||
π Raise warnings for unpopulated columns from insert.from_df |
2022-10-03 |
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β¬οΈ Upgrade |
2022-10-03 |
|||
β»οΈ Inherit |
2022-10-01 |
0.4.1 |
||
β¬οΈ Upgrade to lnschema_core 0.9.0 |
2022-09-30 |
|||
π¨ Add type annotation to ingest |
2022-09-30 |
|||
β»οΈ Generalize pipeline ingestion |
2022-09-30 |
|||
β¨ Added |
2022-09-29 |
|||
π¨ Get db metadata as a dictionary |
2022-09-29 |
|||
π¨ Added |
2022-09-29 |
|||
β¬οΈ Upgrade pkg versions |
2022-09-29 |
|||
πΈ Test notebook integrity before anything else |
2022-09-26 |
|||
π Add a quickstart & update ingest |
2022-09-26 |
|||
π Update bfx ingestion demo |
2022-09-26 |
|||
π Rename insert.features to insert.featureset_from_features |
2022-09-26 |
|||
π Polish documentation |
2022-09-26 |
|||
β¨ Populate |
2022-09-26 |
|||
πΈ Sort select results in DataFrame by source |
2022-09-25 |
|||
β¬οΈ Upgrade to core schema 0.7.3 |
2022-09-25 |
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π©Ή Removed logging for inserting link tables |
2022-09-24 |
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β¨ Ingest bfx outputs with sample metadata |
2022-09-24 |
|||
π· Improve notebook test function |
2022-09-23 |
|||
π§± Improved code infra |
2022-09-23 |
0.4.0 |
||
β¨ Account for multiple |
2022-09-23 |
|||
β»οΈ Refactored feature model ingestion |
2022-09-23 |
|||
β»οΈ Refactored insert |
2022-09-22 |
|||
β¬οΈ Upgrade |
2022-09-22 |
|||
β¬οΈ Upgrade to core schema 0.7.2 |
2022-09-21 |
|||
π |
2022-09-21 |
0.3.11 |
||
π Fixed column mapping |
2022-09-19 |
0.3.10 |
||
β¨ Allow batch insertion |
2022-09-19 |
|||
β»οΈ Refactored linked queries |
2022-09-15 |
|||
β¬οΈ Update lnbfx to 0.3.5 |
2022-09-14 |
0.3.9 |
||
π Refactor pipeline logging |
2022-09-14 |
0.3.8 |
||
β¨ Insert unmapped features |
2022-09-14 |
|||
β»οΈ Refactored linked queries |
2022-09-13 |
|||
β¬οΈ Updated wetlab schema |
2022-09-13 |
|||
β»οΈ Refactor pipeline logging |
2022-09-13 |
0.3.7 |
||
β¬οΈ Updated lnbfx version |
2022-09-12 |
0.3.6 |
||
π± Updated cell ranger test dir |
2022-09-12 |
|||
π Fix synchronization error in load |
2022-09-12 |
|||
β¬οΈ Updated setup version |
2022-09-08 |
0.3.5 |
||
β»οΈ Split ingestion logic into IngestObject and IngestPipeline |
2022-09-06 |
|||
π Add flow data ingestion example |
2022-09-06 |
|||
π Added sidebar to guide |
2022-09-06 |
|||
β»οΈ Split pipeline ingestion from non-pipeline ingestion |
2022-09-06 |
|||
β¬οΈ Updated schema module versions |
2022-09-06 |
|||
β»οΈ Refactored |
2022-09-05 |
|||
π Rename |
2022-09-05 |
|||
π Rename |
2022-09-05 |
|||
β»οΈ Refactored guide |
2022-09-03 |
|||
π Prettify documentation |
2022-09-02 |
|||
Update lndb_hub version |
2022-09-01 |
|||
β¨ Allow selecting dobjects by biological entities |
2022-09-01 |
0.3.4 |
||
β¬οΈ Update to sqm 0.0.8 to silence the warnings |
2022-08-30 |
|||
π€‘ R&D team simulation |
2022-08-30 |
|||
πΈ Fix pipeline ingestion logging |
2022-08-30 |
|||
π Move problems page to lamin-profile |
2022-08-30 |
|||
π©Ή Uncomment out sharing tests |
2022-08-30 |
|||
π₯ Removed examples dir |
2022-08-30 |
|||
πΈ Improve delete function |
2022-08-30 |
|||
π¨ Remove |
2022-08-29 |
|||
π Rename |
2022-08-29 |
|||
π¨ Move header call to |
2022-08-29 |
|||
π· Get rid of sqm warnings |
2022-08-29 |
|||
π¨ Simplify loading data |
2022-08-29 |
|||
π· Allow stripping notebooks, upgrade |
2022-08-29 |
0.3.3 |
||
β¨ Use |
2022-08-28 |
|||
β¬οΈ Updated to bionty 0.2.2 |
2022-08-28 |
|||
β¬οΈ Updated to sqm 0.0.7 |
2022-08-28 |
|||
β¬οΈ Updated dependencies |
2022-08-28 |
|||
β¬οΈ Upgrade to |
2022-08-26 |
|||
β»οΈ Update pipeline ingestion to |
2022-08-26 |
|||
π± Add scrnaseq cellranger dataset |
2022-08-26 |
|||
π Fix population of |
2022-08-26 |
|||
β¨ Populate |
2022-08-26 |
|||
β¬οΈ Updated dependencies |
2022-08-26 |
0.3.2 |
||
β»οΈ Refactor |
2022-08-26 |
|||
π§ Temporary solution to extend modules |
2022-08-25 |
0.3.1 |
||
ποΈ Make tables within schema modules configurable |
2022-08-25 |
0.3.0 |
||
βοΈ Fixed typo in check versions |
2022-08-24 |
|||
ποΈ Use id to reference storage |
2022-08-23 |
|||
π Renamed |
2022-08-23 |
|||
β¬οΈ Upgrade to lnbfx 0.2.0 |
2022-08-23 |
|||
π Renamed |
2022-08-23 |
|||
β»οΈ Cleaned up and added a mouse dataset |
2022-08-23 |
|||
β¬οΈ Upgrade lndb-hub to v0.5.0 |
2022-08-23 |
|||
π Added logging to update and delete |
2022-08-22 |
|||
β¨ Autogenerate |
2022-08-22 |
|||
β¬οΈ Upgrade core schema to v0.4.0 |
2022-08-22 |
|||
β¨ Track storage root location |
2022-08-22 |
|||
π Rename schema modules and bioinformatics module |
2022-08-19 |
|||
β¨ Integrate bioinformatics pipline runs |
2022-08-18 |
|||
π Updated docs |
2022-08-18 |
|||
π½ Adapt to |
2022-08-18 |
|||
β‘ Ingest genes properly |
2022-08-16 |
|||
β¨ New readout table, registered species |
2022-08-12 |
|||
π Migrate |
2022-08-04 |
|||
β¬οΈ Upgrade to lndb_setup 0.5.0 |
2022-08-03 |
|||
β¬οΈ Upgrade to |
2022-08-03 |
|||
π Renamed |
2022-08-03 |
|||
π· Cleaner CI environment switching |
2022-08-02 |
0.2.1 |
||
β¬οΈ Upgrade to |
2022-08-02 |
0.2.0 |
||
π Polish the |
2022-08-02 |
|||
π Polish the 4 key tutorial pages |
2022-08-02 |
|||
π Polish |
2022-08-01 |
|||
β¨ Allow ingesting fcs files and selecting genes |
2022-08-01 |
|||
π Prettify user mentions in guide & faq |
2022-08-01 |
|||
β¬οΈ Upgrade to |
2022-08-01 |
|||
π¨ Overhauled guide, renamed |
2022-08-01 |
|||
π©Ή Some fixes of ingesting in-memory dobjects and an analysis draft |
2022-07-31 |
|||
β¨ Select and update metadata |
2022-07-31 |
|||
π Add a problem statement |
2022-07-31 |
|||
β¬οΈ Upgrade to |
2022-07-31 |
|||
π§ Annotate features during ingestion |
2022-07-31 |
|||
π Re-write landing page |
2022-07-30 |
|||
π Improve |
2022-07-30 |
|||
β¬οΈ Upgrade to |
2022-07-29 |
|||
π Move out |
2022-07-29 |
|||
β»οΈ Refactor sharing on the hub |
2022-07-29 |
|||
β¨ Enable sharing dobjects & instances in the hub |
2022-07-29 |
|||
π₯ Moved readout vocab to bioreader |
2022-07-28 |
|||
β¬οΈ Upgrade |
2022-07-26 |
|||
β¬οΈ Upgrade to lndb-cli 0.2.0 |
2022-07-25 |
|||
π Account for table construction in lndb-cli |
2022-07-25 |
|||
π Move CLI code to |
2022-07-24 |
|||
π± Adapted to |
2022-07-24 |
|||
πΈ Let the CLI have actual subcommands |
2022-07-24 |
|||
π· Add time out to GitHub Actions |
2022-07-23 |
|||
π₯ Switched logger to use lamin-logger |
2022-07-23 |
|||
β¨ Annotate biometa when annotating genes |
2022-07-23 |
|||
πΌ Upgrade to schema 0.2.1 |
2022-07-23 |
|||
π¨ Use modular schema structure |
2022-07-22 |
|||
π Move db API from admin to dev |
2022-07-22 |
|||
β¨ Enable annotating features of dobjects |
2022-07-22 |
|||
πΈ Offer manual way of completing a migration |
2022-07-22 |
|||
ποΈ Separate settings into user vs. instance and one file per instance |
2022-07-22 |
|||
π Fix loading of multi-index and non-id tables |
2022-07-21 |
0.1.2 |
||
π Rename table |
2022-07-21 |
|||
π Move version check into correct init |
2022-07-20 |
|||
β¬οΈ Fix the publishing call by upgrading to nbproject 0.4.3 |
2022-07-19 |
0.1.1 |
||
β¨ Add |
2022-07-19 |
0.1.0 |
||
π Rename |
2022-07-17 |
|||
π Migrate schema out to |
2022-07-17 |
|||
β¨ Version dobjects and interfaces |
2022-07-16 |
|||
π Pretty logging |
2022-07-15 |
|||
β¨ Add |
2022-07-14 |
|||
π Add an example of ingesting images |
2022-07-12 |
|||
β¬οΈ Upgrade to nbproject 0.2.1 |
2022-07-12 |
|||
π Fix bug |
2022-07-12 |
|||
π Added example notebook for ingesting fcs files |
2022-07-11 |
|||
β¬οΈ Migrate to nbproject 0.2.0 |
2022-07-11 |
|||
πΈ Auto-check integrity upon data ingestion only on Jupyter Lab |
2022-07-09 |
0.0.9 |
||
π Rename |
2022-07-09 |
|||
πΈ Raise error upon multiple sign ups with same unconfirmed email |
2022-07-09 |
|||
β¨ Allow sharing instances with other users |
2022-07-08 |
|||
ποΈ Improve configuration logic, flow, logging & testing |
2022-07-08 |
|||
β¨ Populate user metadata at sign up |
2022-07-07 |
|||
β¨ Unique user identity across instances |
2022-07-06 |
|||
π§ Enable storing sqlite on S3 |
2022-07-04 |
0.0.8 |
||
π Rename table |
2022-07-04 |
|||
π Rename CLI from |
2022-07-04 |
|||
β¨ Add |
2022-07-03 |
0.0.7 |
||
β»οΈ Refactor file storage |
2022-07-03 |
0.0.6 |
||
β»οΈ Refactor settings |
2022-07-02 |
0.0.5 |
||
π· Switch to nbproject tests & clean up logging |
2022-07-01 |
|||
β¨ Use nbproject publish functionality |
2022-07-01 |
|||
π Rename tutorial to guide |
2022-06-29 |
|||
π· Measure coverage |
2022-06-26 |
|||
ποΈ Settings: From pydantic BaseModel to custom class |
2022-06-25 |
|||
ποΈ Complete refactor of setup, settings & storage management |
2022-06-25 |
|||
β¬οΈ Upgrade to nbproject 0.1a3 |
2022-06-23 |
|||
π One-page layout for data models |
2022-06-14 |
|||
β»οΈ More explicit |
2022-06-14 |
|||
β»οΈ Migrate from sql to sqm everywhere |
2022-06-14 |
|||
β¨ Implement data access log |
2022-06-12 |
0.0.4 |
||
ποΈ Re-organize API |
2022-06-12 |
|||
ποΈ Set up db with sqlmodel, test int ids |
2022-06-11 |
|||
ποΈ Re-designed entire API |
2022-06-10 |
|||
π₯ Remove notion integration up to CLI |
2022-06-10 |
|||
π Rename from lamindb to LaminDB & rewrite the landing page |
2022-06-10 |
0.0.3 |
||
ποΈ Introduce field |
2022-06-09 |
|||
π Rename global |
2022-06-09 |
|||
β¨ Track python package dependencies in |
2022-06-09 |
|||
β¨ Track title of ingesting notebook in |
2022-06-09 |
|||
π Fix user & notebook ingestion, add another test dataset |
2022-06-08 |
|||
β Fix pandas load, add tests for converting between sqlcore & pandas, add tests for setup |
||||
β¨ Add introspection: |
||||
β¨ Add entity |
||||
πΈ Auto-create local storage dir & cache dir |
||||
β Add a test for db creation & file ingestion |
||||
ποΈ Name the database file like the storage root directory |
||||
β»οΈ Refactor |
||||
π§ Refactor |
||||
π₯ Remove versioneer |
||||
π· Track changes as in |
2022-06-07 |
|||
ποΈ Basic file ingestion from a notebook |
2022-06-06 |
|||
π₯ Remove |
2022-06-04 |
|||
π Change format of license file |
2022-05-23 |
|||
π Fix faq link |
2022-05-26 |
|||
β»οΈ Update to cookiecutter 0.2.0 |
2022-05-23 |
|||
π More narrow sidebar |
2022-05-11 |
|||
π Switch |
2022-05-11 |
|||
π Polish the documentation |
2022-05-11 |
|||
π Migrated from |