lamindb

A data framework for biology.

Registries:

Artifact()	Artifacts: datasets & models stored as files, folders, or arrays.
Collection()	Collections: collections of artifacts.
Transform()	Data transformations.
Run()	Runs of transforms.
User()	Users.
Storage()	Storage locations.
ULabel()	Universal labels (valid categories).
Feature()	Numerical and categorical random variables.
FeatureSet()	Feature sets.

Key functionality:

connect(slug, *[, db, storage, ...])	Connect to instance.
track(*[, params, transform, new_run, path])	Track notebook or script run.
finish()	Mark a tracked run as finished.
Annotate()	Annotation flow.
view([n, schema, registries])	View latest metadata state.
save(records[, ignore_conflicts])	Bulk save to registries & storage.

Modules & settings:

integrations	Integrations.
settings	Global Settings.
setup	Setup & configure LaminDB.
UPath(*args, **kwargs)	Paths: low-level key-value access to files/objects.
core	Core library.